Allen Mouse Brain Connectivity Atlas

Web application: http://connectivity.brain-map.org

Allen Reference Atlas (ontology lookup): http://atlas.brain-map.org/atlas?atlas=1

Related white papers: http://help.brain-map.org/display/mouseconnectivity/Documentation

Connectivity atlas specific API page: http://help.brain-map.org/display/mouseconnectivity/API

API example apps: http://www.brain-map.org/api/examples.html

General API documentation: http://help.brain-map.org/display/api/Allen+Brain+Atlas+API

Getting started with python/numpy/scipy

NumPy for Matlab Users (wiki.scipy.org)

NumPy for MATLAB users (mathesaurus)

Python Scientific Lecture Notes (scipy-lectures)