Troubleshooting - ActiveBrainAtlasPipeline/neuroglancer GitHub Wiki
Common problems and their solutions
- When running create_meta.py, the bioformats package complains about missing OMEXML, make sure these packages are at these versions as of July 2021:
- Python 3.6.9 on Ubuntu 18.04
- bioformats==0.1.15
- python-bioformats==4.0.3
- numpy==1.19.3
- python-javabridge==4.0.2
- Python 3.8.10 on Ubuntu 20.04
- bioformats==0.1.15
- python-bioformats==4.0.5
- numpy==1.21.0
- python-javabridge==4.0.3