Environments - ACCESS-NRI/dev-docs GitHub Wiki

Conda

Anaconda Python environment on gadi

Creating a personal environment for debugging

Steps for debugging Payu

  • Populate the ~/.condarc by following the instructions above.
  • $ conda deactivate
  • If that returns the following error, simply follow the instructions, then log out and log back in:
CommandNotFoundError: Your shell has not been properly configured to use 'conda deactivate'.
To initialize your shell, run

    $ conda init <SHELL_NAME>

Currently supported shells are:
  - bash
  - fish
  - tcsh
  - xonsh
  - zsh
  - powershell

See 'conda init --help' for more information and options.

IMPORTANT: You may need to close and restart your shell after running 'conda init'.
  • Create a new Conda environment and install pip: $ conda create -n <environment-name> -c conda-forge pip
  • List the Conda environments: $ conda env list
  • Activate the Conda environment: $ conda activate <environment-name>
  • $ cd <payu-source-repository>
  • $ pip install -e .
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