access_NewSun_GCOM_build - ACCESS-NRI/accessdev-Trac-archive GitHub Wiki
#!html
<h1 style="text-align: center; color: green"> ACCESS GCOM Build Documentation</h1>
#!html
<h2 style="text-align: center; color: blue"> Below is extract from raijin:~access/apps/gcom/GCOM4.4/readme_azs</h2>
[Thu 18/7/2013]
Set up gcom4.4 library on raijin,
using path /projects/access/apps/gcom/GCOM4.4
1. From package ExtUM8.4.tgz, get "Exported_GCOM_vn4.4.tgz".
2. run tar -zxvf Exported_GCOM_vn4.4.tgz
GCOM source in Exported_GCOM_vn4.4.tgz unpacks into:
---/Exported_GCOM_vn4.4/GCOM/trunk
3. Update these variables in the script to suit local
config:
config_list BASE_DIR WORKING_COPY
GCOM_HOST GCOM_OUTDIR
#------------------------------------------------------------------------------
# diff extract_script \
# ~access/apps/gcom/GCOM4.4/Exported_GCOM_vn4.4//GCOM/trunk/build/ext_scripts/meto_linux.scr
#------------------------------------------------------------------------------
# < config_list="linux_ifort_serial linux_ifort_mpich2 "
# ---
# > config_list="linux_ifort_serial linux_ifort_mpich2 linux32B_ifort_serial"
#------------------------------------------------------------------------------
# < BASE_DIR="/projects/access/apps/gcom/GCOM4.4"
# ---
# > BASE_DIR="/data/local/${LOGNAME}"
#------------------------------------------------------------------------------
# < WORKING_COPY="Exported_GCOM_vn4.4/GCOM/trunk"
# ---
# > WORKING_COPY="GCOM_working_copy"
#------------------------------------------------------------------------------
# < export GCOM_HOST=raijin
# ---
# > export GCOM_HOST=$HOSTNAME
#------------------------------------------------------------------------------
# < export GCOM_OUTDIR=/projects/access/apps/gcom/GCOM4.4/outdir
# ---
# > export GCOM_OUTDIR=/var/tmp/gcom_extract
#------------------------------------------------------------------------------
4. Execute the customised extract script
$ module use ~access/modules
$ module load fcm
$ ./extract_script
5. For now, only build mpp version, using 12.1.8.273
-- discuss with Ilia regarding compile options,
decided: -xavx -O3 -g -fp-model precise -traceback -vec-report2
do not need openmp for now
$ cd /projects/access/apps/gcom/GCOM4.4/Extracted_Code/linux_ifort_mpich2/cfg
$ edit bld.cfg accordingly (go to the directory and diff the bld.cfg's there
to see changes)
-- use environment set in ~access/umdir/prg_envs/prg_env_raijin_84
$ cd /projects/access/apps/gcom/GCOM4.4/Extracted_Code/linux_ifort_mpich2
$ source /projects/access/umdir/prg_envs/prg_env_raijin_84_12.1.8.273
$ fcm build
6. Set up /projects/access/apps/gcom/GCOM4.4/bld_mpp_i12.1.8.273_ompi1.6.3/
.and. /projects/access/apps/gcom/GCOM4.4/bld_mpp_i12.1.8.273_ompi1.6.3-O2/
For builds with "-O3" and "-O2" respectively.
Move lib/ and inc/ created after "fcm build" to those locations.
7. [Thu 25/7/2013] Rename directory to .../bld_mpp_12.1.8.273_1.6.3
==================================================================================
#!html
<h2 style="text-align: center; color: blue"> Changes since the initial set-up to meet emerging needs:</h2>
-
Need to differentiate between ngamai and raijin gcom build:
-
Additional sub-directory (raijin/ngamai) have been inserted into the path.
-
Currently the following gcom libraries have been built:
- /projects/access/apps/gcom/GCOM4.4/raijin/bld_mpp_12.1.8.273_1.6.5
- /projects/access/apps/gcom/GCOM4.4/raijin/bld_mpp_12.1.8.273_1.6.3
- /projects/access/apps/gcom/GCOM4.4/raijin/bld_mpp_12.1.8.273_1.6.3-O2
-
open_mp version of GCOM is not required currently and have not been built.
-
The naming reflect intel compiler version and openMPI version, not compiler options.
-
This information should be noted in readme files and also available from bld.cfg files in for example: /projects/access/apps/gcom/GCOM4.4/Extracted_Code/linux_ifort_mpich2/cfg
-
On ngamai, there have been need for updated gcom build with new compiler options, keeping to practice of not changing directories already in use, a new name was used.
-
Eg: on ngamai, there is
- ~access/apps/gcom/GCOM3.5/ngamai/bld_12.1.8.273_1.6.5_optx/
- ~access/apps/gcom/GCOM3.5/ngamai/bld_12.1.8.273_1.6.3_new_optns-03/
-
Obviously names concocted in a hurry... improvement would be welcome, in particular for new GCOM libraries.
-
There are a number of other gcom builds in raijin:/projects/access/apps/gcom/
-
Some rationalisation will no doubt become desirable at some point
-
The naming also do not identify whether it is for raijin or ngamai - which will present difficulty when synchronisation between raijin:~access and ngamai:~access is being addressed.