access_GCOM - ACCESS-NRI/accessdev-Trac-archive GitHub Wiki
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<h1 style="text-align: center; color: blue"> GCOM Documentation Wiki Page </h1>
From version 5.0, GCOM is in the shared repository (fcm keyword gcom.x) and included in the local mirror (keyword gcom.xm).
From vn5.1 the NCI configuration is included in the trunk but the extract script was missing. I added this in branch branches/dev/martindix/vn5.1_nci_config
To build, first check out the branch on accessdev
fcm co fcm:gcom.xm_br/dev/martindix/vn5.1_nci_config gcom_wc
Copy the gcom_wc
directory to raijin. Note that the extract script expects this to be copied to $WORKDIR.
On raijin
cd $WORKDIR/gcom_wc/fcm-make/ext-scripts
module use ~access/modules
module load fcm
module load openmpi/1.6.5
module load intel-fc/14.2.144
./nci_linux_ext_bld.scr
This will create several directories
% ls $WORKDIR/gcom_build/
nci_raijin_ifort_mpp nci_raijin_ifort_mpp_tune
nci_raijin_ifort_mpp_gcom_test nci_raijin_ifort_serial
nci_raijin_ifort_mpp_mpl_test nci_raijin_ifort_serial_gcom_test
nci_raijin_ifort_mpp_sums
To test
% mpirun -np 4 $WORKDIR/gcom_build/nci_raijin_ifort_mpp_gcom_test/build/bin/gcom_test.exe
% mpirun -np 4 $WORKDIR/gcom_build/nci_raijin_ifort_mpp_mpl_test/build/bin/mpl_test.exe
% mpirun -np 4 $WORKDIR/gcom_build/nci_raijin_ifort_mpp_sums/build/bin/sums_test.exe
Note that the gcom_test is supposed to end with an abort.
To install as a module, copy the include and lib directories from $WORKDIR/gcom_build/nci_raijin_ifort_mpp/build/
to the appropriate directory in ~access/apps/gcom
.
In GCOM 5.2 the NCI extract scripts are included in the trunk so the procedure above works with the trunk.
Scott has also added rose stem tests that build and optionally install the library. See rose-stem/site/nci/README
in the GCOM source tree.
There is a module ~access/modules/gcom/5.2_ompi185
built using openmpi/1.8.5
and intel-fc/15.0.133
. This is used in the UM vn10.2 rose stem testing.