Page Index - rezakj/iCellR GitHub Wiki
52 page(s) in this GitHub Wiki:
- Home
- Single (i) Cell R package (iCellR)
- News (April 2021)
- News (July 2020)
- News (May 2020)
- News (April 2020)
- News (Sep. 2018)
- Tutorials and manual
- 001‐ How to install
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- 002‐ Download sample data
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- 003‐ Getting Started
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- 004‐ Clustering
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- 005‐ Data Visualisation and plots
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- 006‐ Find marker genes
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- 007‐ Imputation & gene correlations
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- 008‐ Cell Frequencies & Proportions
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- 009‐ Cell Cycle Analysis
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- 010‐ DE & Average expressions
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- 011‐ Cluster Manipulations & Gating
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- 012‐ Batch Sample alignment
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- 013‐ Demultiplex hashtag oligos (HTOs)
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- 014‐ CITE‐Seq
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- 015‐ Pseudotime analysis using monocle
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- 016‐ scVDJ‐seq data
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- 017‐ Spatial Transcriptomics (ST) analysis
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- 018‐ scATAC‐Seq
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- Cell type prediction
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- Convert Seurat to iCellR
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- how to
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- i.score
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